Modular Extensions and enable_query_strings = TRUE doesnt work

[eluser]wiredesignz[/eluser]
You are not forced to use query_strings to specify controller and method, you can still use URL segments as normal and use query_stings for data only.

Code:

http://domain.tld/module/controller/method?code=1234&more=5678

EDIT:
I have just tested query_strings with Modular Extensions and it works as it should. I suggest you look deeper into your configuration.