Remove index.php is not SEO friendly

[eluser]vincej[/eluser]
CroxNix:

So, just use the CI url helpers to generate all of your urls and there won’t be a problem as they won’t ever put “index.php” in the url unless you don’t have CI set up correctly when removing index.php from the url.

Ummm, I use anchor() all the the time and they all have index in the url .... I guess this means I don't have CI set up properly ...

Can someone elaborate and advise me as to what I should have done at set up and didn't ..

Many thanks