[eluser]jedd[/eluser]
[quote author="webspace unlimited" date="1256005015"]
however the inner pages are not showing present so it seems I am missing a config somewhere for the inner oage links.. any suggestions?
[/quote]
Two.
Define 'inner pages'. In general you should describe errors as clearly and fully as possible. If nothing appears in the browser, confirm (using page-source) that nothing at all is present. That kind of thing.
Consult the [url="http://codeigniter.com/wiki/FAQ"]FAQ[/url] - particularly the section on site moves. It's a work in progress, but has a couple of the easy gotchas that people usually miss. We can expand it with whatever is learned from your current migration.