[eluser]lay-z-cow[/eluser]
Edemilson Lima is right. Mootools has nothing to do with Prototype.
Earlier was moo.fx, which was a effects-only js library to extend Prototype.
But mootools is a standalone framework and not related to Prototype.
Mootools and Prototype have a familiar pinciple (extending native objects, instead of working with namespaces, like jQuery).
If you want to know more about this you should read the article I linked in my last post.